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GeneBee Methods And Algorithms
Databanks screening	Sequence analysis
Screening by keywords	AliBee - Multiple alignment Release 3.0
Pipeline Screening: Keyword -> Similarity	AliGraf - Graphical Alignment  AliComp - Alignments Comparison
Screening by similarity Release 3.0	TreeTop - Phylogenetic Tree Prediction
	DotHelix - Construction of the Full Local Similarity Map
Screening PROSITE databank by protein sequence	RNA secondary structure prediction
	A4 - Adaptive Automated Annotation Release 2.0
Screening SWISSPROT/PDB databanks  by pattern or alignment	OrfBee - ORF Predictor
	IGLA - Pairwise 3D-alignment
Gene Expression Analysis
GEA - System for Gene Expression Analysis

Free Methods Installed On GeneBee
NCBI BLAST 2.2.22 Search	NCBI MegaBlast Service
Basic FASTA 3.4 Homology Search
ClustalW 1.83         [Basic]    [Advanced]	Muscle 3.6

GeneBee Group Collaboration Research
RFBR	Development of Bionformatics Portal for Suppporting Research in Molecular and System Biology
FP6 VIZIER	Comparative Structural Genomics of Viral Enzymes Involved in Replication
INTAS	Global and Local Protein Matching
CRDF	Quality Control, ORF detection and Gene Anotation of Peanibacillus Dendriformix and Peanibacillus Vortex genomes

Any comments or suggestions are welcomed at: nik@genebee.msu.su